BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F10SP1|AL429782
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1439 1425 0.0
>3x_Contig1439
Length = 7662
Score = 1425 bits (719), Expect = 0.0
Identities = 754/763 (98%), Gaps = 2/763 (0%)
Strand = Plus / Minus
Query: 98 tcactgacgttaacgattgccttgaacaaaggcatcttgtcattgatgtagtaataagca 157
||||| || ||||| ||| |||| ||||||| |||||||||||| |||||||||||||||
Sbjct: 7043 tcactcaccttaaccattcccttcaacaaagccatcttgtcattcatgtagtaataagca 6984
Query: 158 tatgttcttcttgggatgtatggcaatttaccaccgccgtaacgttcaatgttcaagtat 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6983 tatgttcttcttgggatgtatggcaatttaccaccgccgtaacgttcaatgttcaagtat 6924
Query: 218 tgaatagccttgtcctttggaggatccaatctgtcgatttgaaggaagtgcaacttggca 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6923 tgaatagccttgtcctttggaggatccaatctgtcgatttgaaggaagtgcaacttggca 6864
Query: 278 tcaccgttcaaatctttcaaaagcttggaagtggttctgatctcagtatcggtaactggg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6863 tcaccgttcaaatctttcaaaagcttggaagtggttctgatctcagtatcggtaactggg 6804
Query: 338 tcaaaaatgtgttgtgttgacatttttgtggtattgagtgtttgtgttttgtgttttgtg 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6803 tcaaaaatgtgttgtgttgacatttttgtggtattgagtgtttgtgttttgtgttttgtg 6744
Query: 398 ttttgtttcgttgtagcggtgaactcaaat-cattgtgatagtataacgtataagttacc 456
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6743 ttttgtttcgttgtagcggtgaactcaaatgcattgtgatagtataacgtataagttacc 6684
Query: 457 aacatcctattgaatagttgaaaaagggacc-cttatttatattcatcaaaaggttctta 515
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6683 aacatcctattgaatagttgaaaaagggaccgcttatttatattcatcaaaaggttctta 6624
Query: 516 tggtacatcgtatcgagattcccaaataggtatattaatcccaaaactcagatttgccaa 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6623 tggtacatcgtatcgagattcccaaataggtatattaatcccaaaactcagatttgccaa 6564
Query: 576 cccagatttccccactagttattatgaaaaaccaggactcaggataagattaaatcttta 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6563 cccagatttccccactagttattatgaaaaaccaggactcaggataagattaaatcttta 6504
Query: 636 ccttgatgaaatttatgttcaatgtcgatgatctctatctattacagccaaaaaaaaaaa 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6503 ccttgatgaaatttatgttcaatgtcgatgatctctatctattacagccaaaaaaaaaaa 6444
Query: 696 aaaagaaagaaaggtagaagtacttatatcgattagatacgactcattcactgattaggt 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6443 aaaagaaagaaaggtagaagtacttatatcgattagatacgactcattcactgattaggt 6384
Query: 756 tcctcgaaagagggaggattaggaacaagttttccttcttactccgcctgtttgctggaa 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6383 tcctcgaaagagggaggattaggaacaagttttccttcttactccgcctgtttgctggaa 6324
Query: 816 agtttgttctctatgtagatacagagacaagacaatgggtacg 858
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6323 agtttgttctctatgtagatacagagacaagacaatgggtacg 6281
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,823
Number of Sequences: 1807
Number of extensions: 16823
Number of successful extensions: 2375
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)